paml: paml (PAML: Phylogenetic Analysis by Maximum Likelihood) paml: paml: PAML is a package of programs for phylogenetic analyses of DNA or paml: protein sequences using maximum likelihood. PAML is not good for paml: tree making. It may be used to estimate parameters and test paml: hypotheses to study the evolutionary process, when you have paml: reconstructed trees using other programs such as PAUP*, PHYLIP, paml: MOLPHY, PhyML, RaxML, etc. paml: paml: Home: http://abacus.gene.ucl.ac.uk/software/paml.html paml: References: /usr/doc/paml-4.8a/References