cistrome-MACS: cistrome-MACS (MACS: Model-based Analysis of ChIP-Seq) cistrome-MACS: cistrome-MACS: Next generation parallel sequencing technologies made chromatin cistrome-MACS: immunoprecipitation followed by sequencing (ChIP-Seq) a popular cistrome-MACS: strategy to study genome-wide protein-DNA interactions, while cistrome-MACS: creating challenges for analysis algorithms. We present Model- cistrome-MACS: based Analysis of ChIP-Seq (MACS) on short reads sequencers such cistrome-MACS: as Genome Analyzer (Illumina / Solexa). cistrome-MACS: cistrome-MACS: Home: http://liulab.dfci.harvard.edu/MACS/ cistrome-MACS: References: /usr/doc/cistrome-MACS-1.4.2/references